Index

A

actor (vibesketch.document.Edit attribute) (vibesketch.document.model.Edit attribute) add() (vibesketch.server.store.Store method) analytic_hessian (vibesketch.inputs.orca_keywords.Method attribute) app (vibesketch.document.model.Provenance attribute) (vibesketch.document.Provenance attribute) approximation (vibesketch.document.JobSpec attribute) (vibesketch.document.model.JobSpec attribute) approximation_keyword() (in module vibesketch.inputs.orca_keywords) APPROXIMATIONS (in module vibesketch.inputs.orca_keywords) Arrow (in module vibesketch.document.model) arrow (vibesketch.document.coordinates.Step attribute) (vibesketch.document.ket.SceneStep attribute) (vibesketch.document.model.Reaction attribute) (vibesketch.document.Reaction attribute)

arrow_kind() (in module vibesketch.document.derive) ARROW_MODES (in module vibesketch.document.ket) arrows (vibesketch.document.ket.KetScene attribute) at (vibesketch.document.Edit attribute) (vibesketch.document.model.Edit attribute) ATOMIC_NUMBER (in module vibesketch.elements) atomic_number() (in module vibesketch.elements) atoms (vibesketch.document.Constraint attribute) (vibesketch.document.model.Constraint attribute) aux_basis (vibesketch.document.JobSpec attribute) (vibesketch.document.model.JobSpec attribute) aux_basis_kind() (in module vibesketch.inputs.orca_keywords) average_mass (vibesketch.chem.report.SpeciesReport attribute) (vibesketch.chem.species.Properties attribute)

B

basis (vibesketch.document.JobSpec attribute) (vibesketch.document.model.JobSpec attribute) basis_family() (in module vibesketch.inputs.orca_keywords) Batch (class in vibesketch.inputs) (class in vibesketch.inputs.registry)

BOND_LENGTH (in module vibesketch.document.ket) bounds (vibesketch.document.ket.KetFragment attribute) bundles (vibesketch.inputs.Batch attribute) (vibesketch.inputs.registry.Batch attribute)

C

calculation_fields() (vibesketch.document.JobSpec static method) (vibesketch.document.model.JobSpec static method) call() (vibesketch.agent.client.RestClient method) Canvas (class in vibesketch.document) (class in vibesketch.document.model) canvas (vibesketch.document.Document attribute) (vibesketch.document.model.Document attribute) centre (vibesketch.document.ket.KetFragment attribute) (vibesketch.document.ket.KetText attribute) charge (vibesketch.chem.report.SpeciesReport attribute) (vibesketch.chem.species.Identity attribute) (vibesketch.document.coordinates.Structure attribute) (vibesketch.document.model.Species attribute) (vibesketch.document.Species attribute) clean() (in module vibesketch.document.clean) clean_2d() (in module vibesketch.chem.clean) clean_ket() (in module vibesketch.document.clean) Cleaned (class in vibesketch.chem.clean) cleaned (vibesketch.document.clean.CleanReport attribute) CleanReport (class in vibesketch.document.clean) client (vibesketch.document.Edit attribute) (vibesketch.document.model.Edit attribute) codename_for_current() (in module vibesketch.codenames) codename_for_version() (in module vibesketch.codenames)

compute_2d() (in module vibesketch.chem.layout) conditions (vibesketch.document.coordinates.Step attribute) (vibesketch.document.formats.Imported attribute) (vibesketch.document.ket.SceneStep attribute) (vibesketch.document.model.Reaction attribute) (vibesketch.document.Reaction attribute) confidence (vibesketch.document.model.Name attribute) (vibesketch.document.Name attribute) (vibesketch.naming.NameResult attribute) Conflict Conformer (class in vibesketch.document) (class in vibesketch.document.model) conformers (vibesketch.chem.embed.Embedded attribute) (vibesketch.document.model.Species attribute) (vibesketch.document.Species attribute) Constraint (class in vibesketch.document) (class in vibesketch.document.model) constraints (vibesketch.document.JobSpec attribute) (vibesketch.document.model.JobSpec attribute) content (vibesketch.document.formats.Payload attribute) (vibesketch.inputs.base.InputFile attribute) (vibesketch.inputs.InputFile attribute) create_app() (in module vibesketch.server) created (vibesketch.document.model.Provenance attribute) (vibesketch.document.Provenance attribute)

D

data (vibesketch.document.Canvas attribute) (vibesketch.document.model.Canvas attribute) default_id (vibesketch.server.store.Store attribute) Derivation (class in vibesketch.document.derive) derive() (in module vibesketch.document.derive) description (vibesketch.agent.mcp.Tool attribute) (vibesketch.inputs.base.InputWriter attribute) (vibesketch.inputs.InputWriter attribute) (vibesketch.inputs.orca.OrcaWriter attribute) (vibesketch.inputs.qcschema.QcschemaInputWriter attribute) (vibesketch.inputs.qcschema.QcschemaMoleculeWriter attribute) (vibesketch.inputs.vibeqc.VibeqcWriter attribute) (vibesketch.inputs.xyz.XyzWriter attribute)

deviation (vibesketch.chem.clean.Cleaned attribute) dirty (vibesketch.server.store.Entry property) dispersion (vibesketch.document.JobSpec attribute) (vibesketch.document.model.JobSpec attribute) dispersion_keyword() (in module vibesketch.inputs.orca_keywords) Document (class in vibesketch.document) (class in vibesketch.document.model) document (vibesketch.document.derive.Derivation attribute) (vibesketch.server.store.Entry attribute) document_json_schema() (in module vibesketch.document) (in module vibesketch.document.schema) DocumentError, [1] dumps() (in module vibesketch.document) (in module vibesketch.document.io)

E

Edit (class in vibesketch.document) (class in vibesketch.document.model) edits (vibesketch.document.model.Provenance attribute) (vibesketch.document.Provenance attribute) electron_count() (vibesketch.document.Conformer method) (vibesketch.document.model.Conformer method) electrons (vibesketch.chem.species.Identity attribute) embed() (in module vibesketch.document.embed) embed_3d() (in module vibesketch.chem.embed) Embedded (class in vibesketch.chem.embed)

embedded (vibesketch.document.embed.EmbedReport attribute) EmbedFailed EmbedReport (class in vibesketch.document.embed) energies (vibesketch.chem.embed.Embedded attribute) entries() (vibesketch.server.store.Store method) Entry (class in vibesketch.server.store) export() (in module vibesketch.document.formats) EXPORT_FORMATS (in module vibesketch.document.formats) ExportRefused extension (vibesketch.document.formats.Payload attribute)

F

failed (vibesketch.document.embed.EmbedReport attribute) fields (vibesketch.inputs.base.InputWriter attribute) (vibesketch.inputs.InputWriter attribute) (vibesketch.inputs.orca.OrcaWriter attribute) (vibesketch.inputs.qcschema.QcschemaInputWriter attribute) (vibesketch.inputs.vibeqc.VibeqcWriter attribute) file_name() (vibesketch.inputs.orca.OrcaWriter method) file_stem() (vibesketch.inputs.vibeqc.VibeqcWriter method) files (vibesketch.inputs.base.InputBundle attribute) (vibesketch.inputs.InputBundle attribute)

find_server() (in module vibesketch.agent.client) format (vibesketch.document.Canvas attribute) (vibesketch.document.model.Canvas attribute) format_for_path() (in module vibesketch.document.formats) formula (vibesketch.chem.report.SpeciesReport attribute) (vibesketch.chem.species.Properties attribute) fragments (vibesketch.document.ket.KetScene attribute) from_data() (in module vibesketch.document) from_qvf() (in module vibesketch.document.qvf) from_structures() (in module vibesketch.document.coordinates)

G

get() (vibesketch.server.store.Store method)

get_writer() (in module vibesketch.inputs) (in module vibesketch.inputs.registry)

H

handle() (in module vibesketch.agent.mcp) has_dispersion (vibesketch.inputs.orca_keywords.Method attribute) has_stereo (vibesketch.chem.species.Identity attribute) has_transition_metal (vibesketch.chem.species.Identity attribute)

head (vibesketch.document.ket.KetArrow attribute) (vibesketch.document.ket.SceneStep attribute) host (vibesketch.document.model.Run attribute) (vibesketch.document.Run attribute) how (vibesketch.chem.perceive.Perceived attribute)

I

id (vibesketch.chem.report.SpeciesReport attribute) (vibesketch.document.coordinates.Step attribute) (vibesketch.document.coordinates.Structure attribute) (vibesketch.document.Job attribute) (vibesketch.document.model.Job attribute) (vibesketch.document.model.Reaction attribute) (vibesketch.document.model.Run attribute) (vibesketch.document.model.Species attribute) (vibesketch.document.Reaction attribute) (vibesketch.document.Run attribute) (vibesketch.document.Species attribute) (vibesketch.server.store.Entry attribute) Identity (class in vibesketch.chem.species) identity() (in module vibesketch.chem.species) import_into() (in module vibesketch.document.formats)

Imported (class in vibesketch.document.formats) ImportFailed inchi (vibesketch.chem.report.SpeciesReport attribute) (vibesketch.chem.species.Properties attribute) inchikey (vibesketch.chem.report.SpeciesReport attribute) (vibesketch.chem.species.Identity attribute) (vibesketch.document.model.Species attribute) (vibesketch.document.Species attribute) InputBundle (class in vibesketch.inputs) (class in vibesketch.inputs.base) InputFile (class in vibesketch.inputs) (class in vibesketch.inputs.base) InputWriter (class in vibesketch.inputs) (class in vibesketch.inputs.base) install_hint() (in module vibesketch.naming) is_reaction_arrow() (in module vibesketch.document.derive)

J

Job (class in vibesketch.document) (class in vibesketch.document.model) job_by_id() (vibesketch.document.Document method) (vibesketch.document.model.Document method)

jobs (vibesketch.document.Document attribute) (vibesketch.document.model.Document attribute) JobSpec (class in vibesketch.document) (class in vibesketch.document.model)

K

kept (vibesketch.document.embed.EmbedReport attribute) ket (vibesketch.document.formats.Imported attribute) KetArrow (class in vibesketch.document.ket) KetFragment (class in vibesketch.document.ket) KetScene (class in vibesketch.document.ket) KetText (class in vibesketch.document.ket)

key (vibesketch.chem.species.Identity property) keyword (vibesketch.inputs.orca_keywords.Method attribute) keyword_line() (vibesketch.inputs.orca.OrcaWriter method) kind (vibesketch.document.Constraint attribute) (vibesketch.document.model.Constraint attribute) (vibesketch.inputs.orca_keywords.Method attribute) known_methods() (in module vibesketch.inputs.orca_keywords)

L

label (vibesketch.chem.report.SpeciesReport attribute) (vibesketch.document.coordinates.Structure attribute) (vibesketch.document.model.Species attribute) (vibesketch.document.Species attribute) layout (vibesketch.chem.clean.Cleaned attribute)

left (vibesketch.document.clean.CleanReport attribute) listing() (vibesketch.agent.mcp.Tool method) load() (in module vibesketch.document) (in module vibesketch.document.io) loads() (in module vibesketch.document) (in module vibesketch.document.io)

M

make_router() (in module vibesketch.server.documents) make_tools() (in module vibesketch.agent.mcp) maxcore_mb (vibesketch.document.model.Resources attribute) (vibesketch.document.Resources attribute) MEDIA_TYPE (in module vibesketch.document.qvf) media_type (vibesketch.document.formats.Payload attribute) (vibesketch.inputs.base.InputFile attribute) (vibesketch.inputs.InputFile attribute) Method (class in vibesketch.inputs.orca_keywords) method (vibesketch.document.Conformer attribute) (vibesketch.document.JobSpec attribute) (vibesketch.document.model.Conformer attribute) (vibesketch.document.model.JobSpec attribute) method_for() (in module vibesketch.inputs.orca_keywords) method_names() (in module vibesketch.inputs.vibeqc) mode (vibesketch.document.ket.KetArrow attribute) model (vibesketch.document.model.Solvent attribute) (vibesketch.document.Solvent attribute) model_config (vibesketch.document.Canvas attribute) (vibesketch.document.Conformer attribute) (vibesketch.document.Constraint attribute) (vibesketch.document.Document attribute) (vibesketch.document.Edit attribute) (vibesketch.document.Job attribute) (vibesketch.document.JobSpec attribute) (vibesketch.document.model.Canvas attribute) (vibesketch.document.model.Conformer attribute) (vibesketch.document.model.Constraint attribute) (vibesketch.document.model.Document attribute) (vibesketch.document.model.Edit attribute) (vibesketch.document.model.Job attribute) (vibesketch.document.model.JobSpec attribute) (vibesketch.document.model.Name attribute) (vibesketch.document.model.Provenance attribute) (vibesketch.document.model.Reaction attribute) (vibesketch.document.model.Resources attribute) (vibesketch.document.model.Run attribute) (vibesketch.document.model.Solvent attribute) (vibesketch.document.model.Species attribute) (vibesketch.document.model.Style attribute) (vibesketch.document.Name attribute) (vibesketch.document.Provenance attribute) (vibesketch.document.Reaction attribute) (vibesketch.document.Resources attribute) (vibesketch.document.Run attribute) (vibesketch.document.Solvent attribute) (vibesketch.document.Species attribute) (vibesketch.document.Style attribute) module vibesketch.agent vibesketch.agent.client vibesketch.agent.mcp vibesketch.chem vibesketch.chem.clean vibesketch.chem.embed vibesketch.chem.layout vibesketch.chem.perceive vibesketch.chem.report vibesketch.chem.species vibesketch.codenames vibesketch.document vibesketch.document.clean vibesketch.document.coordinates vibesketch.document.derive vibesketch.document.embed vibesketch.document.formats vibesketch.document.io vibesketch.document.ket vibesketch.document.model vibesketch.document.qvf vibesketch.document.schema vibesketch.elements vibesketch.inputs vibesketch.inputs.base vibesketch.inputs.orca vibesketch.inputs.orca_keywords vibesketch.inputs.qcschema vibesketch.inputs.registry vibesketch.inputs.vibeqc vibesketch.inputs.xyz vibesketch.naming vibesketch.render vibesketch.server vibesketch.server.documents vibesketch.server.store vibesketch.units

mol (vibesketch.chem.perceive.Perceived attribute) (vibesketch.document.ket.KetFragment attribute) mol_from_smiles() (in module vibesketch.chem.species) molecule() (vibesketch.inputs.qcschema.QcschemaMoleculeWriter method) molecule_reason() (in module vibesketch.document.ket) molecules (vibesketch.document.formats.Imported attribute) molfile() (in module vibesketch.document.ket) monoisotopic_mass (vibesketch.chem.report.SpeciesReport attribute) (vibesketch.chem.species.Properties attribute) multiplicity (vibesketch.chem.report.SpeciesReport attribute) (vibesketch.chem.species.Identity attribute) (vibesketch.document.coordinates.Structure attribute) (vibesketch.document.model.Species attribute) (vibesketch.document.Species attribute)

N

Name (class in vibesketch.document) (class in vibesketch.document.model) name (vibesketch.agent.mcp.Tool attribute) (vibesketch.chem.report.SpeciesReport attribute) (vibesketch.document.coordinates.Structure attribute) (vibesketch.document.model.Solvent attribute) (vibesketch.document.model.Species attribute) (vibesketch.document.Solvent attribute) (vibesketch.document.Species attribute) (vibesketch.inputs.base.InputFile attribute) (vibesketch.inputs.base.InputWriter attribute) (vibesketch.inputs.InputFile attribute) (vibesketch.inputs.InputWriter attribute) (vibesketch.inputs.orca.OrcaWriter attribute) (vibesketch.inputs.qcschema.QcschemaInputWriter attribute) (vibesketch.inputs.qcschema.QcschemaMoleculeWriter attribute) (vibesketch.inputs.vibeqc.VibeqcWriter attribute) (vibesketch.inputs.xyz.XyzWriter attribute)

name_for() (in module vibesketch.naming) NameResult (class in vibesketch.naming) naming_available() (in module vibesketch.naming) NamingUnavailable new_document() (in module vibesketch.document) (in module vibesketch.document.io) node (vibesketch.document.ket.KetFragment attribute) note (vibesketch.naming.NameResult attribute) NotFound NothingDrawn nprocs (vibesketch.document.model.Resources attribute) (vibesketch.document.Resources attribute)

O

open_stereo (vibesketch.chem.embed.Embedded attribute)

OrcaWriter (class in vibesketch.inputs.orca)

P

path (vibesketch.server.store.Entry attribute) Payload (class in vibesketch.document.formats) perceive() (in module vibesketch.chem.perceive) Perceived (class in vibesketch.chem.perceive) pluses (vibesketch.document.ket.KetScene attribute) positions (vibesketch.document.coordinates.Structure attribute) preset (vibesketch.document.model.Style attribute) (vibesketch.document.Style attribute) products (vibesketch.document.coordinates.Step attribute) (vibesketch.document.model.Reaction attribute) (vibesketch.document.Reaction attribute)

program (vibesketch.document.Job attribute) (vibesketch.document.model.Job attribute) (vibesketch.inputs.base.InputBundle attribute) (vibesketch.inputs.InputBundle attribute) Properties (class in vibesketch.chem.species) properties() (in module vibesketch.chem.species) PROTOCOL_VERSIONS (in module vibesketch.agent.mcp) Provenance (class in vibesketch.document) (class in vibesketch.document.model) provenance (vibesketch.document.Document attribute) (vibesketch.document.model.Document attribute)

Q

QcschemaInputWriter (class in vibesketch.inputs.qcschema) QcschemaMoleculeWriter (class in vibesketch.inputs.qcschema) queue (vibesketch.document.model.Run attribute) (vibesketch.document.Run attribute)

qvf_available() (in module vibesketch.document.qvf) QvfError QvfUnavailable

R

raw() (vibesketch.agent.client.RestClient method) reactants (vibesketch.document.coordinates.Step attribute) (vibesketch.document.model.Reaction attribute) (vibesketch.document.Reaction attribute) Reaction (class in vibesketch.document) (class in vibesketch.document.model) reaction (vibesketch.document.formats.Imported attribute) reactions (vibesketch.document.Document attribute) (vibesketch.document.model.Document attribute) read_scene() (in module vibesketch.document.ket) read_structures() (in module vibesketch.document.formats) reagents (vibesketch.document.coordinates.Step attribute) (vibesketch.document.ket.SceneStep attribute) (vibesketch.document.model.Reaction attribute) (vibesketch.document.Reaction attribute) refusals() (vibesketch.inputs.base.InputWriter method) (vibesketch.inputs.InputWriter method) refused (vibesketch.inputs.Batch attribute) (vibesketch.inputs.registry.Batch attribute) register() (in module vibesketch.inputs) (in module vibesketch.inputs.registry)

remove() (vibesketch.server.store.Store method) render() (in module vibesketch.render) render_svg() (in module vibesketch.render) RenderRefused RenderUnavailable replace() (vibesketch.server.store.Store method) report() (in module vibesketch.chem.report) Resources (class in vibesketch.document) (class in vibesketch.document.model) resources (vibesketch.document.JobSpec attribute) (vibesketch.document.model.JobSpec attribute) RestClient (class in vibesketch.agent.client) revision (vibesketch.document.Document attribute) (vibesketch.document.Edit attribute) (vibesketch.document.model.Document attribute) (vibesketch.document.model.Edit attribute) Run (class in vibesketch.document) (class in vibesketch.document.model) run (vibesketch.agent.mcp.Tool attribute) runs (vibesketch.document.Job attribute) (vibesketch.document.model.Job attribute)

S

save() (in module vibesketch.document) (in module vibesketch.document.io) (vibesketch.server.store.Store method) saved_revision (vibesketch.server.store.Entry attribute) SceneStep (class in vibesketch.document.ket) schema (vibesketch.agent.mcp.Tool attribute) SCHEMA_FILE (in module vibesketch.document.schema) SCHEMA_ID (in module vibesketch.document.model) schema_id (vibesketch.document.Document attribute) (vibesketch.document.model.Document attribute) SCHEMA_URI (in module vibesketch.document.schema) serve() (in module vibesketch.agent.mcp) ServerError shown (vibesketch.naming.NameResult property) smiles (vibesketch.chem.report.SpeciesReport attribute) (vibesketch.chem.species.Identity attribute) (vibesketch.document.coordinates.Structure attribute) (vibesketch.document.model.Species attribute) (vibesketch.document.Species attribute) smiles_for_name() (in module vibesketch.naming) Solvent (class in vibesketch.document) (class in vibesketch.document.model) solvent (vibesketch.document.JobSpec attribute) (vibesketch.document.model.JobSpec attribute) solvent_name() (in module vibesketch.inputs.orca_keywords) source (vibesketch.document.model.Name attribute) (vibesketch.document.Name attribute) (vibesketch.naming.NameResult attribute) spec (vibesketch.document.Job attribute) (vibesketch.document.model.Job attribute) Species (class in vibesketch.document) (class in vibesketch.document.model)

species (vibesketch.document.Document attribute) (vibesketch.document.Job attribute) (vibesketch.document.model.Document attribute) (vibesketch.document.model.Job attribute) (vibesketch.inputs.base.InputBundle attribute) (vibesketch.inputs.InputBundle attribute) species_by_id() (vibesketch.document.Document method) (vibesketch.document.model.Document method) species_ids() (vibesketch.document.model.Reaction method) (vibesketch.document.Reaction method) species_mols() (in module vibesketch.document.formats) species_qvf() (in module vibesketch.document.qvf) SpeciesReport (class in vibesketch.chem.report) start_server() (in module vibesketch.agent.client) states (vibesketch.document.JobSpec attribute) (vibesketch.document.model.JobSpec attribute) status (vibesketch.naming.NameResult attribute) Step (class in vibesketch.document.coordinates) Store (class in vibesketch.server.store) Structure (class in vibesketch.document.coordinates) Style (class in vibesketch.document) (class in vibesketch.document.model) style (vibesketch.document.Document attribute) (vibesketch.document.model.Document attribute) STYLES (in module vibesketch.render) submitted (vibesketch.document.model.Run attribute) (vibesketch.document.Run attribute) summary (vibesketch.document.Edit attribute) (vibesketch.document.model.Edit attribute) symbols (vibesketch.document.Conformer attribute) (vibesketch.document.coordinates.Structure attribute) (vibesketch.document.model.Conformer attribute)

T

tail (vibesketch.document.ket.KetArrow attribute) (vibesketch.document.ket.SceneStep attribute) Task (in module vibesketch.document.model) task (vibesketch.document.JobSpec attribute) (vibesketch.document.model.JobSpec attribute) tasks (vibesketch.inputs.base.InputWriter attribute) (vibesketch.inputs.InputWriter attribute) (vibesketch.inputs.orca.OrcaWriter attribute) (vibesketch.inputs.qcschema.QcschemaInputWriter attribute) (vibesketch.inputs.qcschema.QcschemaMoleculeWriter attribute) (vibesketch.inputs.vibeqc.VibeqcWriter attribute) (vibesketch.inputs.xyz.XyzWriter attribute)

text (vibesketch.document.ket.KetText attribute) texts (vibesketch.document.ket.KetScene attribute) thumbnail() (in module vibesketch.render) to_dict() (vibesketch.chem.report.SpeciesReport method) to_json_data() (vibesketch.document.Document method) (vibesketch.document.model.Document method) to_qvf() (in module vibesketch.document.qvf) Tool (class in vibesketch.agent.mcp) TRANSITION_METALS (in module vibesketch.chem.species)

U

UnknownReference, [1] UnknownSpecies

UnknownWriter, [1] unsupported (vibesketch.document.ket.KetFragment attribute)

V

validation_errors() (in module vibesketch.document.io) value (vibesketch.document.Constraint attribute) (vibesketch.document.model.Constraint attribute) (vibesketch.document.model.Name attribute) (vibesketch.document.Name attribute) (vibesketch.naming.NameResult attribute) version_label() (in module vibesketch.codenames) VibeqcWriter (class in vibesketch.inputs.vibeqc) vibesketch.agent module vibesketch.agent.client module vibesketch.agent.mcp module vibesketch.chem module vibesketch.chem.clean module vibesketch.chem.embed module vibesketch.chem.layout module vibesketch.chem.perceive module vibesketch.chem.report module vibesketch.chem.species module vibesketch.codenames module vibesketch.document module vibesketch.document.clean module vibesketch.document.coordinates module vibesketch.document.derive module vibesketch.document.embed module vibesketch.document.formats module

vibesketch.document.io module vibesketch.document.ket module vibesketch.document.model module vibesketch.document.qvf module vibesketch.document.schema module vibesketch.elements module vibesketch.inputs module vibesketch.inputs.base module vibesketch.inputs.orca module vibesketch.inputs.orca_keywords module vibesketch.inputs.qcschema module vibesketch.inputs.registry module vibesketch.inputs.vibeqc module vibesketch.inputs.xyz module vibesketch.naming module vibesketch.render module vibesketch.server module vibesketch.server.documents module vibesketch.server.store module vibesketch.units module

W

warnings (vibesketch.chem.embed.Embedded attribute) (vibesketch.chem.report.SpeciesReport attribute) (vibesketch.document.derive.Derivation attribute) (vibesketch.document.embed.EmbedReport attribute) (vibesketch.server.store.Entry attribute) web_bundle() (in module vibesketch.server) with_edit() (in module vibesketch.document) (in module vibesketch.document.io) write() (vibesketch.inputs.base.InputWriter method) (vibesketch.inputs.InputWriter method)

write_input() (in module vibesketch.inputs) (in module vibesketch.inputs.registry) write_inputs() (in module vibesketch.inputs) (in module vibesketch.inputs.registry) write_scene() (in module vibesketch.document.ket) WriterRefusal, [1] writers() (in module vibesketch.inputs) (in module vibesketch.inputs.registry)

X

xy (vibesketch.chem.clean.Cleaned attribute) xyz_angstrom (vibesketch.document.Conformer attribute) (vibesketch.document.model.Conformer attribute)

XyzWriter (class in vibesketch.inputs.xyz)

Y

yield_ (vibesketch.document.model.Reaction attribute) (vibesketch.document.Reaction attribute)

yield_text (vibesketch.document.coordinates.Step attribute)